@theoriefritze Your points all sound reasonable in principle. Basically, the argument for studying rare endgames boils down to an argument about "transferable skills".
My intuition is that skill transfer is easier when the two situations are similar. So if I want to improve my middle game, it makes more sense to study middle game-looking positions. But that's just intuition.
I'm sure a bunch of psychologists have already studied all that...
Your addon is also interesting. I would just note that the main motivation for this was that I wanted to know what the typical amateur's games looked like. You're rated better than 99% of Lichess players, so I can see you making that kind of judgement. For reference, my peak rating is 1900 (92nd percentile), and I rarely (ever?) make judgements about a position using that kind of reasoning. I know that's a flaw in my game, but still, I'm not sure the selection problem is too huge in that sample.